|
Protein |
Species |
EX |
EM |
e |
F |
Brightness
|
Aggregation |
pKa |
t1/2 |
Source |
Notes |
|
|
|
|
EBFP |
Aequorea victoria |
380 |
440 |
29000 |
0.3 |
9.0 |
Monomer |
|
|
Clontech |
|
|
|
|
|
SuperGlo BFP |
Aequorea victoria |
387 |
450 |
|
|
|
Monomer |
|
|
Qbiogene |
sgBFP |
|
|
|
|
ECFP |
Aequorea victoria |
433 |
475 |
32500 |
0.4 |
13.0 |
Monomer |
4.7 |
|
Clontech |
actually a weak dimer |
|
|
|
|
mCFP |
Aequorea victoria |
433 |
475 |
32500 |
0.4 |
13.0 |
Monomer |
4.7 |
|
[20] true monomer |
|
|
|
|
|
Cerulean |
Aequorea victoria |
433 |
475 |
43000 |
0.6 |
26.7 |
Monomer |
4.7 |
|
|
[13] improved ECFP |
|
|
|
|
AmCyan1 |
Anemonia majano |
458 |
489 |
40000 |
0.2 |
9.6 |
Tetramer |
|
|
Clontech |
[1] more photostable than ECFP |
|
|
|
|
Midoriishi-Cyan |
Acropora sp. |
472 |
495 |
27250 |
0.9 |
24.5 |
Dimer |
6.6 |
|
MBL International |
[14] |
|
|
|
|
CopGFP |
Pontellina plumata |
482 |
502 |
70000 |
0.6 |
42.0 |
Monomer |
4.3 |
|
Evrogen |
Discontinued |
|
|
|
|
TurboGFP |
Pontellina plumata |
482 |
502 |
70000 |
0.5 |
37.1 |
Monomer |
5.2 |
|
Evrogen |
Faster folding, brighter, less pH sensitive than
EGFP |
|
|
|
|
AcGFP1 |
Aequorea coerulescens |
475 |
505 |
50000 |
0.6 |
27.5 |
Monomer |
|
|
Clontech |
(Evrogen) |
|
|
|
|
Azami Green |
Galaxea fascicularis |
492 |
505 |
72300 |
0.7 |
48.4 |
Tetramer |
<5.0 |
|
MBL International |
[11] |
|
|
|
|
mAzami Green |
Galaxea fascicularis |
492 |
505 |
55000 |
0.7 |
40.7 |
Monomer |
5.8 |
|
MBL International |
[11] |
|
|
|
|
ZsGreen1 |
Zoanthus sp. |
493 |
505 |
35600 |
0.6 |
22.4 |
Tetramer |
|
|
Clontech |
[1] |
|
|
|
|
R.muelleri GFP |
Renilla muelleri |
485 |
506 |
|
|
|
à |
|
|
Lux biotechnology |
humanized codon |
|
|
|
|
hrGFP |
Renilla reniformis |
500 |
506 |
|
|
|
àDimer |
|
|
Stratagene |
hr = humanized renilla |
|
|
|
|
hrGFPII |
Renilla reniformis |
500 |
506 |
|
|
|
àDimer |
|
|
Stratagene |
brighter form of hrGFP |
|
|
|
|
EGFP |
Aequorea victoria |
488 |
507 |
56000 |
0.6 |
33.6 |
Monomer |
|
|
Clontech |
actually a weak dimer |
|
|
|
|
mGFP |
Aequorea victoria |
488 |
507 |
56000 |
0.6 |
33.6 |
Monomer |
|
|
[20] true monomer |
|
|
|
|
|
Emerald |
Aequorea victoria |
487 |
509 |
57500 |
0.7 |
39.1 |
Monomer |
|
|
|
[8] EGFP derivative; 5-fold brighter at 37¡ C |
|
|
|
|
SuperGlo GFP |
Aequorea victoria |
474 |
509 |
|
|
|
Monomer |
|
|
Qbiogene |
sgGFP |
|
|
|
|
Ptilosarcus GFP |
Ptilosarcus |
485 |
508 |
22450 |
|
|
à |
|
|
Lux biotechnology |
humanized codon |
|
|
|
|
R.reniformis GFP |
Renilla reniformis |
485 |
508 |
15840 |
|
|
àDimer |
|
|
Lux biotechnology |
native codon |
|
|
|
|
GFPuv |
Aequorea victoria |
395 |
509 |
30000 |
0.8 |
23.7 |
Monomer |
|
|
Clontech |
[22] |
|
|
|
|
Sapphire |
Aequorea victoria |
399 |
511 |
29000 |
0.6 |
18.6 |
Monomer |
|
|
|
[8] H9-40 |
|
|
|
|
T-Sapphire |
Aequorea victoria |
399 |
511 |
44000 |
0.6 |
26.4 |
Monomer |
|
|
|
[12] faster folding |
|
|
|
|
Monster GFP |
Montastrea cavernosa |
505 |
515 |
|
|
|
à |
|
|
Promega |
(hMGFP) |
|
|
|
|
EYFP |
Aequorea victoria |
514 |
527 |
83400 |
0.6 |
50.9 |
Monomer |
|
|
Clontech |
actually a weak dimer |
|
|
|
|
mYFP |
Aequorea victoria |
514 |
527 |
83400 |
0.6 |
50.9 |
Monomer |
|
|
[20] true monomer |
|
|
|
|
|
Topaz |
Aequorea victoria |
514 |
527 |
94500 |
0.6 |
56.7 |
Monomer |
|
|
|
[8] |
|
|
|
|
Venus |
Aequorea victoria |
515 |
528 |
92200 |
0.6 |
52.6 |
Monomer |
6 |
|
|
[9] EYFP derivative; brighter & less Cl/pH sensitive |
|
|
|
|
Citrine |
Aequorea victoria |
516 |
529 |
77000 |
0.8 |
58.5 |
Monomer |
5.7 |
|
[2] EYFP derivative; Less Cl, pH sensitive |
|
|
|
|
|
PhiYFP |
Phialidium sp. |
525 |
537 |
130000 |
0.4 |
52.0 |
Monomer |
6 |
|
Evrogen |
|
|
|
|
|
mHoneydew |
Discosoma sp. |
487/504 |
537/562 |
17000 |
0.1 |
2.0 |
Monomer |
<4.0 |
|
[16] |
|
|
|
|
|
ZsYellow1 |
Zoanthus sp. |
529 |
539 |
20200 |
0.4 |
8.5 |
Tetramer |
|
|
Clontech |
[1] |
|
|
|
|
mBanana |
Discosoma sp. |
540 |
553 |
6000 |
0.7 |
4.2 |
Monomer |
6.7 |
1 |
[16] |
|
|
|
|
|
mKusabira-Orange |
Fungia concinna |
548 |
559 |
51600 |
0.6 |
31.0 |
Monomer |
5 |
|
MBL International |
[14] |
|
|
|
|
Kusabira-Orange |
Fungia concinna |
548 |
561 |
73700 |
0.5 |
33.2 |
Dimer |
<5.0 |
|
MBL International |
[14] |
|
|
|
|
mOrange |
Discosoma sp. |
548 |
562 |
71000 |
0.7 |
49.0 |
Monomer |
<6.5 |
2.5 |
[16] acid quenched |
|
|
|
|
|
cOFP |
Cerianthus SP. |
552 |
564 |
|
|
|
Tetramer |
|
|
Stratagene |
[21] |
|
|
|
|
DsRed-Express |
Discosoma sp. |
557 |
579 |
30100 |
0.4 |
12.6 |
Tetramer |
|
0.7 |
Clontech |
[4] DsRed.T1 |
|
|
|
|
tdimer2(12) |
Discosoma sp. |
552 |
579 |
60000 |
0.7 |
41.4 |
Dimer |
4.8 |
~2 |
[3] *Tandem Dimer |
|
|
|
|
|
tdimer2(12) |
Discosoma sp. |
552 |
579 |
120000* |
0.7 |
81.6* |
Monomer* |
4.8 |
~2 |
[3] *Tandem Dimer |
|
|
|
|
|
dTomato |
Discosoma sp. |
554 |
581 |
69000 |
0.7 |
47.6 |
Dimer |
4.7 |
1 |
[16] |
|
|
|
|
|
tdTomato |
Discosoma sp. |
554 |
581 |
138000* |
0.7 |
95.2* |
Monomer* |
4.7 |
1 |
[16] *Tandem Dimer |
|
|
|
|
|
mTangerine |
Discosoma sp. |
568 |
585 |
38000 |
0.3 |
11.4 |
Monomer |
5.7 |
|
[16] |
|
|
|
|
|
AsRed2 |
Anemonia sulcata |
576 |
592 |
56200 |
0.1 |
2.8 |
Tetramer |
|
|
Clontech |
asFP595 from [6]? |
|
|
|
|
mStrawberry |
Discosoma sp. |
574 |
596 |
90000 |
0.3 |
26.1 |
Monomer |
<4.5 |
0.8 |
[16] |
|
|
|
|
|
mRFP1 |
Discosoma sp. |
584 |
607 |
44000 |
0.3 |
11.0 |
Monomer |
4.5 |
<1 |
[3] |
|
|
|
|
|
Jred |
Anthomedusae jellyfish |
584 |
610 |
44000 |
0.2 |
8.8 |
Monomer |
|
|
Evrogen |
|
|
|
|
|
mCherry |
Discosoma sp. |
587 |
610 |
72000 |
0.2 |
15.8 |
Monomer |
<4.5 |
0.3 |
[16] |
|
|
|
|
|
eqFP611 |
Discosoma sp. |
559 |
611 |
78000 |
0.5 |
35.1 |
Tetramer |
<4.0 |
|
|
[7] |
|
|
|
|
HcRed1 |
Heteractis crispa |
588 |
618 |
80000 |
0 |
3.2 |
Dimer |
|
|
Clontech |
HcRed-2A from [5] |
|
|
|
|
mRaspberry |
Discosoma sp. |
598 |
625 |
86000 |
0.2 |
12.9 |
Monomer |
|
~0.9 |
[15] "R10D6" |
|
|
|
|
|
t-HcRed |
Heteractis crispa |
590 |
637 |
160000* |
0 |
6.4* |
Monomer* |
|
|
Evrogen |
*Tandem Dimer |
|
|
|
|
mPlum |
Discosoma sp. |
590 |
649 |
41000 |
0.1 |
4.1 |
Monomer |
|
~1.7 |
[15] "R23H6" |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
||||||||||||||
|
Notes: |
||||||||||||||
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
This table is was created by Eric Schroeter in the
Rachel Wong Lab at Washington University School of Medicine. It is based on
Kurt Thorn's lab GFP web page (http://cgr.harvard.edu/thornlab/gfps.htm) ,
which is a excellent online resource. |
||||||||||||||
|
e = Extinction Coefficient |
||||||||||||||
|
* Tandem dimers are made by making a fusing two
tandem copies of the coding sequence with an intervening linker, so that
"dimerization" occurs intramolecularly. |
||||||||||||||
|
à Most of the native FP's found form oligomers.
Renilla reniformis GFP is found as a dimer, while the anthazoan FP's are
generally found to be tetramers. |
||||||||||||||
|
As of 3 March 2005, Clontech's no longer has a
license for "Enhanced" Fluorescent Proteins and does not sell or
support them. |
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|
References: |
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|
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1. Matz, M.V., et al., Fluorescent proteins from
nonbioluminescent Anthozoa species. Nat Biotechnol, 1999. 17: p. 969-973. |
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2. Griesbeck, O., et al., Reducing the
environmental sensitivity of yellow fluorescent protein. Mechanism and
applications. |
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3. Campbell, R.E., et al., A monomeric red
fluorescent protein. |
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4. Bevis, B.J. and B.S. Glick, Rapidly maturing
variants of the Discosoma red fluorescent protein (DsRed). |
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5. Gurskaya, N.G., et al., GFP-like chromoproteins
as a source of far-red fluorescent proteins. |
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6. Lukyanov, K.A., et al., Natural animal
coloration can be determined by a nonfluorescent green fluorescent protein
homolog. |
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|
7. Wiedenmann, J., et al., A far-red fluorescent
protein with fast maturation and reduced oligomerization tendency from |
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8. Cubitt, A.B., L.A. Woollenweber, and R. Heim, Understanding
structure-function relationships in the Aequorea victoria |
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9. Nagai, T., et al., A variant of yellow
fluorescent protein with fast and efficient maturation for cell-biological
applications. |
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10. Patterson, G.H. and J. Lippincott-Schwartz, A
Photoactivatable GFP for Selective Photolabeling of Proteins and Cells. |
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11. Karasawa, S. et al., A green-emitting
fluorescent protein from Galaxeidae coral and its monomeric version for use in |
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12. Zapata-Hommer O. and Griesbeck O., Efficiently
folding and circularly permuted variants of the Sapphire mutant of GFP. |
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13. Rizzo, M.A., et al., An improved cyan
fluorescent protein variant useful for FRET. Nat Biotechnol, 2004. 22(4):p. 445-449. |
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14. Karasawa, S., et al., Cyan-emitting and
orange-emitting fluorescent proteins as a donor/acceptor pair for
fluorescence |
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15. Wang, L. et al., Evolution of new nonantibody
proteins via iterative somatic hypermutation. |
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16. Shaner, N.C. et al., Improved monomeric red,
orange, and yellow fluorescent proteins derived from Discosoma sp. |
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17. Chudakov, D.M. et al., Photoswitchable cyan
fluorescent protein for protein tracking. |
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18. Wiedenmann, J. et al., EosFP, a fluorescent
marker protein with UV-inducible green-to-red fluorescence conversion. |
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19. Ando, R. et al., Regulated fast
nucelocytoplasmic shuttling observed by reversible protein highlighting. |
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20. Zacharias, D. et al., Partitioning of
Lipid-Modifed Monomeric GFPs into Membrane Microdomains of Live Cells |
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21. Ip D.T. et al., Crystallization and preliminary
crystallographic analysis of a novel orange fluorescent protein from |
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22. Crameri, A., et al. (1996) Improved green
fluorescent protein by molecular evolution using DNA shuffling. Nature
Biotechnol. 14:315-319. |
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