Protein

Species

EX

EM

e

F

Brightness

Aggregation

pKa

t1/2

Source

Notes

 

 

 

EBFP

Aequorea victoria

380

440

29000

0.3

9.0

Monomer

 

 

Clontech 

 

 

 

 

SuperGlo BFP

Aequorea victoria

387

450

 

 

 

Monomer

 

 

Qbiogene

sgBFP

 

 

 

ECFP

Aequorea victoria

433

475

32500

0.4

13.0

Monomer

4.7

 

Clontech

actually a weak dimer

 

 

 

mCFP

Aequorea victoria

433

475

32500

0.4

13.0

Monomer

4.7

 

www.tsienlab.ucsd.edu

[20] true monomer

 

 

 

Cerulean

Aequorea victoria

433

475

43000

0.6

26.7

Monomer

4.7

 

 

[13] improved ECFP

 

 

 

AmCyan1

Anemonia majano

458

489

40000

0.2

9.6

Tetramer

 

 

Clontech 

[1] more photostable than ECFP

 

 

 

Midoriishi-Cyan

Acropora sp.
ÒMidori-ishiÓ

472

495

27250

0.9

24.5

Dimer

6.6

 

MBL International

[14]

 

 

 

CopGFP

Pontellina plumata

482

502

70000

0.6

42.0

Monomer

4.3

 

Evrogen

Discontinued

 

 

 

TurboGFP

Pontellina plumata

482

502

70000

0.5

37.1

Monomer

5.2

 

Evrogen

Faster folding, brighter, less pH sensitive than EGFP

 

 

 

AcGFP1

Aequorea coerulescens

475

505

50000

0.6

27.5

Monomer

 

 

Clontech

(Evrogen)

 

 

 

Azami Green

Galaxea fascicularis
"Azami-Sango"

492

505

72300

0.7

48.4

Tetramer

<5.0

 

MBL International

[11]

 

 

 

mAzami Green

Galaxea fascicularis
Azami-Sango"

492

505

55000

0.7

40.7

Monomer

5.8

 

MBL International

[11]

 

 

 

ZsGreen1

Zoanthus sp.

493

505

35600

0.6

22.4

Tetramer

 

 

Clontech 

[1]

 

 

 

R.muelleri GFP

Renilla muelleri

485

506

 

 

 

à

 

 

Lux biotechnology

humanized codon

 

 

 

hrGFP

Renilla reniformis

500

506

 

 

 

àDimer

 

 

Stratagene

hr = humanized renilla

 

 

 

hrGFPII

Renilla reniformis

500

506

 

 

 

àDimer

 

 

Stratagene

brighter form of hrGFP

 

 

 

EGFP

Aequorea victoria

488

507

56000

0.6

33.6

Monomer

 

 

Clontech

actually a weak dimer

 

 

 

mGFP

Aequorea victoria

488

507

56000

0.6

33.6

Monomer

 

 

www.tsienlab.ucsd.edu

[20] true monomer

 

 

 

Emerald

Aequorea victoria

487

509

57500

0.7

39.1

Monomer

 

 

 

[8] EGFP derivative; 5-fold brighter at 37¡ C

 

 

 

SuperGlo GFP

Aequorea victoria

474

509

 

 

 

Monomer

 

 

Qbiogene

sgGFP

 

 

 

Ptilosarcus GFP

Ptilosarcus

485

508

22450

 

 

à

 

 

Lux biotechnology

humanized codon

 

 

 

R.reniformis GFP

Renilla reniformis

485

508

15840

 

 

àDimer

 

 

Lux biotechnology

native codon

 

 

 

GFPuv

Aequorea victoria

395

509

30000

0.8

23.7

Monomer

 

 

Clontech 

[22]

 

 

 

Sapphire

Aequorea victoria

399

511

29000

0.6

18.6

Monomer

 

 

 

[8] H9-40

 

 

 

T-Sapphire

Aequorea victoria

399

511

44000

0.6

26.4

Monomer

 

 

 

[12] faster folding

 

 

 

Monster GFP

Montastrea cavernosa

505

515

 

 

 

à

 

 

Promega

(hMGFP)

 

 

 

EYFP

Aequorea victoria

514

527

83400

0.6

50.9

Monomer

 

 

Clontech 

actually a weak dimer

 

 

 

mYFP

Aequorea victoria

514

527

83400

0.6

50.9

Monomer

 

 

www.tsienlab.ucsd.edu

[20] true monomer

 

 

 

Topaz

Aequorea victoria

514

527

94500

0.6

56.7

Monomer

 

 

 

[8]

 

 

 

Venus

Aequorea victoria

515

528

92200

0.6

52.6

Monomer

6

 

 

[9] EYFP derivative; brighter & less Cl/pH sensitive

 

 

 

Citrine

Aequorea victoria

516

529

77000

0.8

58.5

Monomer

5.7

 

www.tsienlab.ucsd.edu

[2] EYFP derivative; Less Cl, pH sensitive

 

 

 

PhiYFP

Phialidium sp.

525

537

130000

0.4

52.0

Monomer

6

 

Evrogen

 

 

 

 

mHoneydew

Discosoma sp.

487/504

537/562

17000

0.1

2.0

Monomer

<4.0

 

www.tsienlab.ucsd.edu

[16]

 

 

 

ZsYellow1

Zoanthus sp.

529

539

20200

0.4

8.5

Tetramer

 

 

Clontech

[1]

 

 

 

mBanana

Discosoma sp.

540

553

6000

0.7

4.2

Monomer

6.7

1

www.tsienlab.ucsd.edu

[16]

 

 

 

mKusabira-Orange

Fungia concinna
ÒKusabira-ishiÓ

548

559

51600

0.6

31.0

Monomer

5

 

MBL International

[14]

 

 

 

Kusabira-Orange

Fungia concinna
ÒKusabira-ishiÓ

548

561

73700

0.5

33.2

Dimer

<5.0

 

MBL International

[14]

 

 

 

mOrange

Discosoma sp.

548

562

71000

0.7

49.0

Monomer

<6.5

2.5

www.tsienlab.ucsd.edu

[16] acid quenched

 

 

 

cOFP

Cerianthus SP.

552

564

 

 

 

Tetramer

 

 

Stratagene

[21]

 

 

 

DsRed-Express

Discosoma sp.

557

579

30100

0.4

12.6

Tetramer

 

0.7

Clontech

[4] DsRed.T1

 

 

 

tdimer2(12)

Discosoma sp.

552

579

60000

0.7

41.4

Dimer

4.8

~2

www.tsienlab.ucsd.edu

[3] *Tandem Dimer

 

 

 

tdimer2(12)

Discosoma sp.

552

579

120000*

0.7

81.6*

Monomer*

4.8

~2

www.tsienlab.ucsd.edu

[3] *Tandem Dimer

 

 

 

dTomato

Discosoma sp.

554

581

69000

0.7

47.6

Dimer

4.7

1

www.tsienlab.ucsd.edu

[16]

 

 

 

tdTomato

Discosoma sp.

554

581

138000*

0.7

95.2*

Monomer*

4.7

1

www.tsienlab.ucsd.edu

[16] *Tandem Dimer

 

 

 

mTangerine

Discosoma sp.

568

585

38000

0.3

11.4

Monomer

5.7

 

www.tsienlab.ucsd.edu

[16]

 

 

 

AsRed2

Anemonia sulcata

576

592

56200

0.1

2.8

Tetramer

 

 

Clontech

asFP595 from [6]?

 

 

 

mStrawberry

Discosoma sp.

574

596

90000

0.3

26.1

Monomer

<4.5

0.8

www.tsienlab.ucsd.edu

[16]

 

 

 

mRFP1

Discosoma sp.

584

607

44000

0.3

11.0

Monomer

4.5

<1

www.tsienlab.ucsd.edu

[3]

 

 

 

Jred

Anthomedusae jellyfish

584

610

44000

0.2

8.8

Monomer

 

 

Evrogen

 

 

 

 

mCherry

Discosoma sp.

587

610

72000

0.2

15.8

Monomer

<4.5

0.3

www.tsienlab.ucsd.edu

[16]

 

 

 

eqFP611

Discosoma sp.

559

611

78000

0.5

35.1

Tetramer

<4.0

 

 

[7]

 

 

 

HcRed1

Heteractis crispa

588

618

80000

0

3.2

Dimer

 

 

Clontech

HcRed-2A from [5]

 

 

 

mRaspberry

Discosoma sp.

598

625

86000

0.2

12.9

Monomer

 

~0.9

www.tsienlab.ucsd.edu

[15] "R10D6"

 

 

 

t-HcRed

Heteractis crispa

590

637

160000*

0

6.4*

Monomer*

 

 

Evrogen

*Tandem Dimer

 

 

 

mPlum

Discosoma sp.

590

649

41000

0.1

4.1

Monomer

 

~1.7

www.tsienlab.ucsd.edu

[15] "R23H6"

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Notes:

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

This table is was created by Eric Schroeter in the Rachel Wong Lab at Washington University School of Medicine. It is based on Kurt Thorn's lab GFP web page (http://cgr.harvard.edu/thornlab/gfps.htm) , which is a excellent online resource.
Values are from either from the suppliers or are referenced if published . I've attempted include information on all commercially available FP's.
Some FP's that are essentially obsolete have been included for comparison to more current versions.

e = Extinction Coefficient
F = Quantum Yield
Brightness is the product of the extinction coefficient (
e) and the quantum yield (F), divided by 1000

* Tandem dimers are made by making a fusing two tandem copies of the coding sequence with an intervening linker, so that "dimerization" occurs intramolecularly.
The resulting expressed polypeptide contains two complete b-cans and two equally absorbing chromophores. Since values for e and brightness are based on
molarity these values are doubled.

à Most of the native FP's found form oligomers. Renilla reniformis GFP is found as a dimer, while the anthazoan FP's are generally found to be tetramers.

  As of 3 March 2005, Clontech's no longer has a license for "Enhanced" Fluorescent Proteins and does not sell or support them.
Amersham Bioscience now manages the licensing of these proteins, although the individual plasmids don't appear to be listed among their products.

References:

 

1. Matz, M.V., et al., Fluorescent proteins from nonbioluminescent Anthozoa species. Nat Biotechnol, 1999. 17: p. 969-973.

2. Griesbeck, O., et al., Reducing the environmental sensitivity of yellow fluorescent protein. Mechanism and applications.
J Biol Chem
, 2001. 276(31): p. 29188-94.

3. Campbell, R.E., et al., A monomeric red fluorescent protein.
Proc Natl Acad Sci U S A
, 2002. 99(12): p. 7877-82.

4. Bevis, B.J. and B.S. Glick, Rapidly maturing variants of the Discosoma red fluorescent protein (DsRed).
Nat Biotechnol
, 2002. 20(1): p. 83-7.

5. Gurskaya, N.G., et al., GFP-like chromoproteins as a source of far-red fluorescent proteins.
FEBS Lett
, 2001. 507(1): p. 16-20.

6. Lukyanov, K.A., et al., Natural animal coloration can be determined by a nonfluorescent green fluorescent protein homolog.
J Biol Chem
, 2000. 275(34): p. 25879-82.

7. Wiedenmann, J., et al., A far-red fluorescent protein with fast maturation and reduced oligomerization tendency from
Entacmaea quadricolor (Anthozoa, Actinaria). Proc Natl Acad Sci U S A
, 2002. 99(18): p. 11646-51.

8. Cubitt, A.B., L.A. Woollenweber, and R. Heim, Understanding structure-function relationships in the Aequorea victoria
green fluorescent protein. Meth Cell Biol
, 1999. 58: p. 19-30.

9. Nagai, T., et al., A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications.
Nat Biotechnol
, 2002. 20(1): p. 87-90.

10. Patterson, G.H. and J. Lippincott-Schwartz, A Photoactivatable GFP for Selective Photolabeling of Proteins and Cells.
Science
, 2002. 297(5588): p. 1873-7.

11. Karasawa, S. et al., A green-emitting fluorescent protein from Galaxeidae coral and its monomeric version for use in
fluorescent labeling. J Biol Chem
, 2003. 278(36):p. 34167-71.

12. Zapata-Hommer O. and Griesbeck O., Efficiently folding and circularly permuted variants of the Sapphire mutant of GFP.
BMC Biotechnol
, 2003. 3(5).

13. Rizzo, M.A., et al., An improved cyan fluorescent protein variant useful for FRET. Nat Biotechnol, 2004. 22(4):p. 445-449.

14. Karasawa, S., et al., Cyan-emitting and orange-emitting fluorescent proteins as a donor/acceptor pair for fluorescence
resonance energy transfer. Biochem J
, 2004. 381:p. 307-312

15. Wang, L. et al., Evolution of new nonantibody proteins via iterative somatic hypermutation.
Proc Natl Acad Sci
, 2004. 101(48):p. 16745-16749.

16. Shaner, N.C. et al., Improved monomeric red, orange, and yellow fluorescent proteins derived from Discosoma sp.
red fluorescent protein. Nat Biotechnol
, 2004.

17. Chudakov, D.M. et al., Photoswitchable cyan fluorescent protein for protein tracking.
Nat Biotechnol
2004. 22(11):p. 1435-1439.

18. Wiedenmann, J. et al., EosFP, a fluorescent marker protein with UV-inducible green-to-red fluorescence conversion.
Proc Natl Acad Sci
2004. 101(45): p.15905-15910

19. Ando, R. et al., Regulated fast nucelocytoplasmic shuttling observed by reversible protein highlighting.
Science
2004. 306: p. 1370-1373.

20. Zacharias, D. et al., Partitioning of Lipid-Modifed Monomeric GFPs into Membrane Microdomains of Live Cells
Science
2002. 296: p 913-916.

21. Ip D.T. et al., Crystallization and preliminary crystallographic analysis of a novel orange fluorescent protein from
the Cnidaria tube anemone Cerianthus sp.
Acta Crystallogr D Biol Crystallogr. 2004 60:340-1

22. Crameri, A., et al. (1996) Improved green fluorescent protein by molecular evolution using DNA shuffling. Nature Biotechnol. 14:315-319.